TAP Trihelix in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

trihelix

(Domain names are clickable)



List of proteins (7)

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namename additionClick button to show/hide sequence: Download sequence?
c0_seq1_19_rccomp10475_c0_seq1_19 [5025 - 1828] (REVERSE SENSE) len=5175 path=[5149:0-1126 10447:1127-1130 6276:1131-1216 6362:1217-2192 7338:2193-2195 7341:2196-3387 8533:3388-3399 8545:3400-3465 8611:3466-3490 8636:3491-4711 9857:4712-4733 9879:4734-5174]
c0_seq2_19_rccomp10475_c0_seq2_19 [5013 - 1828] (REVERSE SENSE) len=5163 path=[5149:0-1126 10447:1127-1130 6276:1131-1216 6362:1217-2192 7338:2193-2195 7341:2196-3387 8545:3388-3453 10492:3454-3478 8636:3479-4699 9857:4700-4721 9879:4722-5162]
c0_seq3_19_rccomp10475_c0_seq3_19 [4833 - 1828] (REVERSE SENSE) len=5153 path=[5149:0-1126 10447:1127-1130 6276:1131-1216 6362:1217-2192 7338:2193-2195 7341:2196-3387 8533:3388-3399 8545:3400-3465 8611:3466-3490 8636:3491-4711 9879:4712-5152]
c0_seq4_19_rccomp10475_c0_seq4_19 [4821 - 1828] (REVERSE SENSE) len=5141 path=[5149:0-1126 10447:1127-1130 6276:1131-1216 6362:1217-2192 7338:2193-2195 7341:2196-3387 8545:3388-3453 10492:3454-3478 8636:3479-4699 9879:4700-5140]
c0_seq5_17_rccomp10475_c0_seq5_17 [4734 - 1828] (REVERSE SENSE) len=4875 path=[5149:0-1126 10447:1127-1130 6276:1131-1216 6362:1217-2192 7338:2193-2195 7341:2196-3387 8533:3388-3399 8545:3400-3465 8611:3466-3490 8636:3491-4711 10775:4712-4874]
c0_seq6_17_rccomp10475_c0_seq6_17 [4722 - 1828] (REVERSE SENSE) len=4863 path=[5149:0-1126 10447:1127-1130 6276:1131-1216 6362:1217-2192 7338:2193-2195 7341:2196-3387 8545:3388-3453 10492:3454-3478 8636:3479-4699 10775:4700-4862]
c0_seq1_1[2 - 649] len=651 path=[1:0-650]
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum